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AATVar : a database of human alpha-1 antitrypsin variants

bandeau base AAT

Pcardiff

Mutation sequence analysis

Contributed by
CHU Lyon

HGVS nomenclature (NM_000295.4)

Nomenclarure including the signal peptide
c.839A>T;c.710T>C
Type of variation
AAT variant
Mutation Location
Exon 3
Genetic background
M1 Ala
ACMG classification
Pathogenic
Comments
rs121912714

AAT variant and Q0 alleles

Variant name
Pcardiff
Also Known as
pathogenicity
Deficient
HGVS nomenclature protéine
p.Asp280Val;p.Val237Ala
3D position of aa affecteded
The aa residue at position 280 corresponds to a point where a bêta-sheet strand (B3) undergoes a sharp turn to become an alpha-helix (G)

Mobility on polyacrylamide gel

P

Mobility on agarose gel

P

AATserum level (g/L)

Heterozygous
Homozygous

Anti-elastolytic activity (IU/L)

Heterozygous
Homozygous
Comments
see data for Plowell variant

Occurrence

Ethnic background without frequency range
British

Ethnic background and frequency

Frequency range

from (%)
To (%)

Group tested

Size
Description (who was tested)
Occurrence comments

Overall comments

Occurrence comments
see data for Plowell variant

References

Medline ID
2606478
Authors
Graham A,Kalsheker NA,Newton CR,Bamforth FJ,Powell SJ,Markham AF
Title
Molecular characterisation of three alpha-1-antitrypsin deficiency variants: proteinase inhibitor (Pi) nullcardiff (Asp256----Val); PiMmalton (Phe51----deletion) and PiI (Arg39----Cys).
Journal
Human genetics
Year
1989
Volume
84
Num
1
Pp
55-8

Last Update

First publication : 07-04-2020 22:20 Last update : 08-13-2020 18:11 by Pr Curateur test
 
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